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BLAST sequence homology search on a taxonomically corrected, non-repeating, adenovirus database (containing not published sequences, too).
Balazs Harrach, Budapest, Hungary.

BLAST parameters:     Program Database

Your query sequence : 

  Test sequence: 
        1 aagcttatca ggaagttact atttcaaacc agcacaataa ttcaggattt acagcttttg
       61 ctaatgcgtc tttacctaga gaaggccacc cttacccagc taattggcct tatccgctca
      121 ttggagaaaa cgtggccccg tgtaccaccc agaaaaagtt tttgtgtgac aagactctgt
      181 ggcgcatccc attctctagc aattttatgt caatgggctc gctcactgac ttggggcaaa
 

Further BLAST parameters: Expect (E) Cutoff (S) Matrix (M)

Strand Genetic code

View results here online . or . EMail the results to me
enter your e-mail address, and verify it is correct !
NOTE : TblastX doesn't work for the moment with the nr database (due to the size of this database).

Regulating output:

Descriptions (V)   Alignments (B)     Sorting
Histogram (H) Text output (remove the HTML parser)
Your query sequence's comments (optional):

 

Detailed description of the official taxonomy of adenoviruses in December 2005. For summary, see the short list.

Citation:

Benkő M, Harrach B, Both GW, Russell WC, Adair BM, Ádám É, de Jong JC, Hess M, Johnson M, Kajon A, Kidd AH, Lehmkuhl HD, Li Q.-G, Mautner V, Pring-Akerblom P, Wadell G (2005) Family Adenoviridae. Fauquet CM, Mayo MA, Maniloff J, Desselberger U, Ball LA (szerk): Virus Taxonomy. VIIIth Report of the International Committee on Taxonomy of Viruses. Elsevier, New York pp 213-228


Comments & suggestions:
     Taxonomy - Maria Benko  Database - Balazs Harrach  (helped by Tibor Papp, Márta Lorincz and Szilvia Farkas)
     Program/cgi - Marcell Gal, elo-discardthipart-@vmri.hu (The excellent blast program was provided by NCBI.)