LOCUS AF153447 2099 bp DNA 22-MAY-1999
DEFINITION Ovine adenovirus 3 hexon gene, partial cds;
protease gene, complete
cds; and DNA-binding protein gene,
partial cds.
ACCESSION AF153447
KEYWORDS .
SOURCE Ovine adenovirus 3.
ORGANISM
Ovine adenovirus A
Viruses; dsDNS viruses; no RNA
stage; Adenoviridae; Mastadenovirus;
Ovine adenovirus A.
REFERENCE 1
(bases 1 to 2099)
AUTHORS
Barbezange,C., Benko,M., Dan,A. and Harrach,B.
TITLE
DNA sequencing and phylogenetic analysis of the protease gene of
Ovine adenovirus 3 suggest that
adenoviruses of sheep belong to two
different genera
JOURNAL
Unpublished
REFERENCE 2
(bases 1 to 2099)
AUTHORS
Harrach,B.
TITLE
Direct Submission
JOURNAL
Submitted (22-MAY-1999) Veterinary Medical Research Institute,
Hungarian Academy of Sciences,
Hungaria krt. 21., Budapest H-1143,
Hungary
FEATURES Location/Qualifiers
source 1..2099
/organism="Ovine
adenovirus A"
/strain="PX611"
/serotype="3"
/specific_host="Ovis
aries"
/lab_host="primery
lamb kidney cells"
/plasmid="HindIII-D"
precursor_RNA <1..1053
/note="for both
hexon and protease mRNAs"
/citation=[1]
/evidence=not_experimental
CDS <1..428
/note="major capsid
protein"
/citation=[1]
/codon_start=3
/evidence=not_experimental
/product="hexon"
/translation="AYQEVTISNQHNNSGFTAFANASLPREGHPYPANWPYPLIGENV
APCTTQKKFLCDKTLWRIPFSSNFMSMGSLTDLGQNLLYANAAHALDMTFEVDAMDEP
TLLYVLFEVFDVVRVHQPHRGVIETVYLRTPFSAGNATT"
CDS 437..1054
/note="endoprotease;
23K protein; function=proteolysis
during virus
maturation"
/citation=[1]
/codon_start=1
/evidence=not_experimental
/product="protease"
/translation="MGSMEEELRAIVRDLGISPYFLGTFDKRFPGFLHRDKLSCAIVN
TAARETGGAHWLALAWFPNAKNFYFFDPFGFSDHKLKQIYQFEYEGLLRRSALAGDGC
VNLVKSTETVQGPNSAACGLFCCMFLHAFVNWPDRPMSRNPTMDLLTGVPNADMMKPS
SLAILRENQNQLYKFLSSHSPYFRAHRPQIERDTSFNKLLELKNQ"
polyA_signal 1025..1030
/note="for the mRNAs
of hexon and protease; one of two
possible sites"
/citation=[1]
/evidence=not_experimental
misc_feature complement(1025..1030)
/note="Le Moullec
site [(T)n(A)p(T)q; n, p, q>=1],
described to follow the
poly(A) sites in the adenoviruses
(Le Moullec et al.,
1983); for the mRNA of DNA-binding
protein"
/citation=[1]
/note="unclassified
site"
/evidence=not_experimental
polyA_site complement(1048)
/note="for the mRNA
of DNA-binding protein"
/citation=[1]
/evidence=not_experimental
mRNA complement(1048..>2099)
/citation=[1]
/product="DNA-binding protein"
/evidence=not_experimental
polyA_signal 1050..1055
/note="for the mRNAs
of hexon and protease; one of two
possible sites"
/citation=[1]
/evidence=not_experimental
polyA_site 1053
/note="for the mRNAs
of hexon and protease (if the
putative poly(A) signal
at nt 1025-1030 is the correct
one)"
/citation=[1]
/evidence=not_experimental
misc_feature 1062..1067
/note="Possible Le
Moullec site if the hexon/protease
poly(A) site is at
1053"
/citation=[1]
/note="unclassified
site"
/evidence=not_experimental
polyA_signal complement(1062..1067)
/note="for the mRNA
of DNA-binding protein"
/citation=[1]
/evidence=not_experimental
polyA_site 1069
/note="for the mRNAs
of hexon and protease (if the
putative poly(A) signal
at nt 1050-1055 is the correct
one)"
/citation=[1]
/evidence=not_experimental
misc_feature 1085..1091
/note="Possible Le
Moullec site if the hexon/protease
poly(A) site is at
1069"
/citation=[1]
/note="unclassified
site"
/evidence=not_experimental
CDS complement(1094..>2099)
/note="function=single stranded DNA binding"
/codon_start=2
/product="DNA-binding protein"
/translation="SFLVPLKVDIKDLTLLPDAGTMECFRKGVQSWLNEQKRFVPLTF
STQKSLQTVVARFVFDFVLRAAEICPSDWNPNGCVVWEHKTNEEKLYCLHGLPMINKE
QIVEMDINSENGQRALKESPERAKIVTNKWGRSVVQMKNADAMCCFYDLKSSLNSFSS
ESCGYFYSDGNKARQGFYQIRDFVKAMYPQMPKAGEMLLMPLVCECNYGHHVIPLLGK
QTCKVTPFALNAVSNIDRSLVEDAKVLATLNNPVVLVFQCCNPVFRNTKANPQKNCDF
KISSTDVVMALQLAKQMWSSLTGTKASIVVQEFKWQPQYRVQNTLLPTGQDDADECLF
"
BASE COUNT 552 a
492 c 466 g 589 t
ORIGIN
1 aagcttatca ggaagttact atttcaaacc
agcacaataa ttcaggattt acagcttttg
61 ctaatgcgtc tttacctaga gaaggccacc
cttacccagc taattggcct tatccgctca
121 ttggagaaaa cgtggccccg tgtaccaccc
agaaaaagtt tttgtgtgac aagactctgt
181 ggcgcatccc attctctagc aattttatgt
caatgggctc gctcactgac ttggggcaaa
241 acttgttgta cgctaacgcc gctcatgcgc
tagacatgac ttttgaagtg gatgctatgg
301 atgaacctac attgctgtat gtgctgtttg
aggtatttga tgttgtgcgc gtgcatcaac
361 cacacagggg cgtcattgaa accgtgtacc
tgagaactcc gttctctgct ggcaacgcca
421 ctacataatc gccgcgatgg gctccatgga
agaagagttg cgagctattg ttcgcgactt
481 aggcataagt ccttactttt taggaacttt
tgacaagcgc ttcccaggtt tcttgcatag
541 agataaactg agttgcgcga ttgtgaatac
agcggcccgc gagaccggtg gggcccactg
601 gctggcgcta gcttggtttc caaatgctaa
aaacttttac ttttttgacc catttgggtt
661 ttctgaccat aaacttaaac agatttatca
gtttgaatat gaaggcttgt tgcgccgaag
721 cgcgctagcg ggcgatggct gtgtaaattt
agtgaaaagc actgaaacag ttcaagggcc
781 aaacagcgcc gcctgtgggt tgttttgttg
catgtttttg cacgcttttg taaattggcc
841 agaccgccca atgagccgca accccacaat
ggatttgcta actggggtac ctaatgctga
901 tatgatgaaa ccgtcgtcgc ttgcgatttt
aagagaaaac caaaatcagc tgtataaatt
961 tttgtcatcc cactccccat actttcgcgc
tcaccgcccc cagattgaac gcgatacctc
1021 ttttaataaa ctgctagaac tcaaaaatca
ataaactgaa ctttattgaa cttttgcgtg
1081 tcagtatttt gctttaaaaa agacattcgt
cggcatcatc ttggccggtg gggaggagag
1141 tattttggac tctgtactga ggttgccact
tgaactcttg aaccacaatg gaagccttag
1201 tgccagtgag cgaagaccac atttgcttag
ccagctgcag agccatcaca acatcagttg
1261 agcttatttt aaaatcacaa tttttctgag
gattcgcttt agtgttgcgg aacactgggt
1321 tgcagcactg gaacacgaga accacagggt
tgtttaaagt ggccagcacc ttagcatctt
1381 ccactaaaga acggtcgatg ttgctgacgg
cattcaaagc aaaaggggta actttgcaag
1441 tttgcttgcc aagaagagga ataacgtggt ggccgtagtt
gcattcacac accaacggca
1501 tcaacagcat ctcgccagcc ttgggcatct
gcggatacat ggcttttaca aaatctctaa
1561 tttggtaaaa gccttgacgg gctttgttcc
cgtcagaata aaagtatccg caagattcag
1621 agctaaaaga atttaaagaa gattttagat
cgtagaagca gcacatggca tcagcattct
1681 tcatctgcac cacactgcgg ccccacttgt
tggtgacaat tttagccctc tctggcgact
1741 cttttagagc gcgttgaccg ttctcgctgt
ttatatccat ctccacaatt tgctccttgt
1801 taatcatagg cagcccgtgc agacagtaga
gcttttcttc atttgtttta tgttcccaca
1861 cgacgcaccc gttagggttc caatcagaag
ggcaaatttc agccgctctt agcacaaaat
1921 caaaaacaaa tctagccacc acagtctgta
aagacttttg tgttgaaaaa gtaagcggca
1981 caaatctctt ctgctcgttg agccagcttt
ggacgccttt tctgaagcac tccatagtgc
2041 ctgcgtctgg aagcagcgta agatctttta
tatccacttt taatggcact aaaaagctt
//