Available sequences from adenovirus species
 
There are five ICTV accepted adenovirus genera:
 
Mastadenovirus (from mammals), Aviadenovirus (birds), Atadenovirus (reptiles, ruminants, birds, and brush-tail 
possum); Siadenovirus (frog, birds, tortoise), Ichtadenovirus (fish). 
Official species names are shown in magenta and bold (the word "adenovirus" omitted), tentative ICTV species are magenta but not bold. 
Own publication: P, 3D structure still: 3d, movable: 3D [needs e.g., RasMol]. Further abbreviations and notes are below the table.
                                
                 P                                        <<<<P>>>     P   P                 P  P,P     P
                                                                  3d  3d  3d
                                     3D         3D                    3D  3D 3D                 3D,3D
Mast          ITR E1a b IX IVa pol pTP VA 52 pIIIa III pVII V pX pVI II 23 DBP 100 33 pVIII E3  IV E4 ITR
Bovine A    B1   +   +  +  +  +   +   +   -  +   +   +   +   +  +  +   +   +  +   +   +    +  +   +  +  +  P
Bovine B    B3   +   +  +  +  +   +   +   -  +   +   +   +   +  +  +   +   +  +   +   +    +  +   +  +  +
Bovine C    B10  +   ^  ^  ^  ^   ^   ^   -  ~   ~   ^   ^   ^  ^  ^   +   +  +   +   +    +  +   +  +  +  P P
Canine      C1   +   +  +  +  +   +   +   -  +   +   +   +   +  +  +   +   +  +   +   +    +  +   +  +  +  P
            C2   +   +  +  +  +   +   +   -  +   +   +   +   +  +  +   +   +  +   +   +    +  +   +  +  +
Equine A    E1   +                        -      ~   ~   ~         ~   +   ~  ~   ~                     +
Equine B    E2          ~     ~   ~   ~   -                        ~   +   +  ~   ~  
Human A     H12  +   +  +  +  +   +   +   1  +   +   +   +   +  +  +   +   +  +   +   +    +  +   +  +  +
            H18  +   +  +  +  +   +   +   1  +   +   +   +   +  +  +   +   +  +   +   +    +  +   +  +  + NEW
            H31  +   +  +  +  +   +   +   1  +   +   +   +   +  +  +   +   +  +   +   +    +  +   +  +  + 
Human B     H3   +   +  +  +  +   +   +   2  +   +   +   +   +  +  +   +   +  +   +   +    +  +   +  +  +
            H7   +   +  +  +  +   +   +   2  +   +   +   +   +  +  +   +   +  +   +   +    +  +   +  +  +
            H16  +   +  +  +  +   +   +   2  +   +   +   +   +  +  +   +   +  +   +   +    +  +   +  +  +
            H21  +   +  +  +  +   +   +   2  +   +   +   +   +  +  +   +   +  +   +   +    +  +   +  +  +
            H11  +   +  +  +  +   +   +   +  +   +   +   +   +  +  +   +   +  +   +   +    +  +   +  +  +
            H14  +   +  +  +  +   +   +   +  +   +   +   +   +  +  +   +   +  +   +   +    +  +   +  +  +
            H34  +   +  +  +  +   +   +   +  +   +   +   +   +  +  +   +   +  +   +   +    +  +   +  +  +
            H35  +   +  +  +  +   +   +   +  +   +   +   +   +  +  +   +   +  +   +   +    +  +   +  +  +
            H50  +   +  +  +  +   +   +   +  +   +   +   +   +  +  +   +   +  +   +   +    +  +   +  +  +
H55 recomb 11/14 +   +  +  +  +   +   +   +  +   +   +   +   +  +  +   +   +  +   +   +    +  +   +  +  + renamed
            S21  +   +  +  +  +   +   +   +  +   +   +   +   +  +  +   +   +  +   +   +    +  +   +  +  +
Human C     B9                                                         ^
            H1   +   +  +  +  +   +   +   2  +   +   +   +   +  +  +   +   +  +   +   +    +  +   +  +  +
            H1 from cat                                                ~                                  P
            H2   +   +  +  +  +   +   +   2  +   +   +   +   +  +  +   +   +  +   +   +    +  +   +  +  +
            H5   +   +  +  +  +   +   +   2  +   +   +   +   +  +  +   +   +  +   +   +    +  +   +  +  +
            H6   o   o  o  o  o   ~   ~   2  ~   o   o   o   o  o  o    +    o  o   o   o    o  o   +  o  o 
Human D     H8   +   +  +  +  +   +   +   2  +   +   +   +   +  +  +   +   +  +   +   +    +  +   +  +  + 
            H9   +   +  +  +  +   +   +   2  +   +   +   +   +  +  +   +   +  +   +   +    +  +   +  +  +
            H10  +                ~   ~   2  ~                         +
            H13                   ~   ~   2  ~                         +
            H15                   ~   ~   2  ~                         +                      +   +
            H17  +   +  +  +  +   +   +   2  +   +   +   +   +  +  +   +   +  +   +   +    +  +   +  +  +
            H19  +   +  +  +  +   +   +   2  +   +   +   +   +  +  +   +   +  +   +   +    +  +   +  +  +
            H20                   ~   ~   2  ~                         +
            H22  +   +  +  +  +   +   +   2  +   +   +   +   +  +  +   +   +  +   +   +    +  +   +  +  + 
            H23                   ~   ~   2  ~                         +
            H24                   ~   ~   2  ~                         +
            H25                   ~   ~   2  ~                         +
            H26  +   +  +  +  +   +   +   2  +   +   +   +   +  +  +   +   +  +   +   +    +  +   +  +  + 
            H27                   ~   ~   2  ~                         +
            H28  +   +  +  +  +   +   +   2  +   +   +   +   +  +  +   +   +  +   +   +    +  +   +  +  +
            H29                   ~   ~   2  ~                         +
            H30                   ~   ~   2  ~                         +
            H32                   ~   ~   2  ~                         +
            H33                   ~   ~   2  ~                         +
            H36  o   o  o  o  o  o~   ~   2  ~   o   o   o   o  o  o   +   o  o   o   o    o  o   o  o  o P NEWEST
            H37  +   +  +  +  +   +   +   2  +   +   +   +   +  +  +   +   +  +   +   +    +  +   +  +  +
            H38                   ~   ~   2  ~                         +
            H39                   ~   ~   2  ~                         +
            H42                   ~   ~   2  ~                         +
            H43                   ~   ~   2  ~                         +
            H44                   ~   ~   2  ~                         +
            H45                   ~   ~   2  ~                         +
            H46  +   +  +  +  +       +   2  +   +   +   +   +  +  +   +   +  +   +   +    +  +   +  +  +
            H47                   ~   ~   2  ~                         +
            H48  +   +  +  +  +   +   +   2  +   +   +   +   +  +  +   +   +  +   +   +    +  +   +  +  + 
            H49  +   +  +  +  +   +   +   2  +   +   +   +   +  +  +   +   +  +   +   +    +  +   +  +  + 
            H51                   ~                                    +
            H53  +   +  +  +  +   +   +   2  +   +   +   +   +  +  +   +   +  +   +   +    +  +   +  +  + P 
   H54 (Kobe-H)  +   +  +  +  +   +   +   2  +   +   +   +   +  +  +   +   +  +   +   +    +  +   +  +  + 
            H56 (USA)
 H57 in progress, Jan 2010; (USA: HAdV-D species Study Group)
 new type Ad-Cor-96-487                                                 ~                          ~        
 Please, contact us (harrach@vmri.hu) before giving further HAdV type numbers to be connected with other proposers
Human E     H4   +   +  +  +  +   +   +   2  +   +    +   +  +  +  +   +  +   +   +   +   +   +   +  +  +
            S22  +   +  +  +  +   +   +   2  +   +    +   +  +  +  +   +  +   +   +   +   +   +   +  +  +
            S23  +   +  +  +  +   +   +   2  +   +    +   +  +  +  +   +  +   +   +   +   +   +   +  +  +
            S24  +   +  +  +  +   +   +   2  +   +    +   +  +  +  +   +  +   +   +   +   +   +   +  +  +
            S25  +   +  +  +  +   +   +   2  +   +    +   +  +  +  +   +  +   +   +   +   +   +   +  +  +
Human F     H40  +   +  +  +  +   +   +   1  +   +    +   +  +  +  +   +  +   +   +   +   +   +   s l +  +
            H41  +   +  +  +  +   +   +   -  +   +    +   +  +  +  +   +  +   +   +   +   +   +   +  +  + 
            S20  +   +  +  +  +   +   +   1  +   +    +   +  +  +  +   +  +   +   +   +   +   +   +  +  +
Human G     H52  +   +  +  +  +   +   +   1  +   +    +   +  +  +  +   +  +   +   +   +   +   +   +  +  +  P
            S1   +   +  +  +  +   +   +   1  +   +    +   +  +  +  +   +  +   +   +   +   +   +   +  +  +  P
            S7   +   +  +  +  +   +   +   1  +   +    +   +  +  +  +   +  +   +   +   +   +   +   +  +  + 
Murine A    M1   +   +  +  +  +   +   +   -  +   +    +   +  +  +  +   +  +   +   +   +   +   +   +  +  +
Murine B    M2                                                         ~
Murine C    M3   +   +  +  +  +   +   +   -  +   +    +   +  +  +  +   +  +   +   +   +   +   +   +  +  + 
Ovine A     02                                                         ~                                  
            O3    o                                                   ~ ~ +   ~                         o  P
            O4                                                         ~                                  
            O5                                                         ~o                                 
            B2   +   +  +  +  +   +   +   -  +   +    +   +  +  +  +   +  +   +   +   +   +   +   +  +  +  P
Ovine B     01                                                         ~                                  
Porcine A   P1   +                                                                        +   +   ~     +
            P2   o                                                                        +   +   ~     o
            P3   +   +  +  +  +   +   +   -  +   +    +   +  +  +  +   +  +   +   +   +   +   +   +  +  +
Porcine B   P4   o      +                                                                +   +   +
Porcine C   P5   +   +  +  +  +   +   +   -  +   +    +   +  +  +  +   +  +   +   +   +   +   +   +  +  +
Tree shrew  TS1  +   +  +  +  +   +   +   -  +   +    +   +  +  +  +   +  +   +   +   +   +   +   +  +  +
Simian A    S3   +   +  +  +  +   +   +   1  +   +    +   +  +  +  +   +  +   +   +   +   +   +   +  +  +  P
Goat        G2                                                         ~                                   
Guinea pig  GP1                                                        ~
Ovine C     O6                    ^                                    ~                                  
Squirrel    Sq1                                                        ^                                   P
Other SAdVs: (species designation is not clear in case of most monkey AdVs.)
            S2                            +  
            S4                            +
            S5
            S6   +   +  +  +  +   +   +   1  +   +    +   +  +  +  +   +  +   +   +   +   +   +   +  +  + 
            S8   +                ~                                                                     +
            S9                            +
            S10                           +
            S11                           +
            S12
            S13                           +
            S14                           +
            S15  o   o  o  o  o   o   o   o  o   o    o   o  o  o  o   o  o   o   o   o   o   o   o  o  o
            S16  +   +  ~ ~        ^   ~   +  ~
            S17                   ^
            S18                   ^
            S19                           +
18 novel chimpanzee AdV full genomes
8 gorilla AdV full genomes
6 bonobo (pigmy chimpanzee) AdV full genomes
3 novel macaques AdV full genomes
bat (Ryukyu flying fox/Japan)     ~   ~                             ~  
bat (Pipistrellus/Germany)        ~                                                                          NEW
bat (BtAdV-TJM/China)
bat common noctule (Nyctalus 
  noctula/Hungary)                ^
lesser horseshoe bat (Rhinolophus 
   hipposideros/Hungary)          ^
alpaca                                                                 ~                                 
 
                ITR E1a b IX IVa pol pTP VA 52 pIIIa III pVII V pX pVI II 23 DBP 100 33 pVIII E3  IV  E4  ITR
Avi               ---URFs--             -                   -                               -      U VA'
Falcon A falcon 1:
     Northern Aplomado falcon     ~                   +    +  -  +  +  +
     American kestrel                                                  ~  
     Orange-breasted falcon                                            ~
     Teita falcon                                                      ~
Fowl A      F1   +   +        +   +   +   -  +   +    +    +  -  +  +  +  +   +   +   +   +   -  l s  + +  +
Fowl B      F5                    ~                                    ~ 
Fowl C      F4   +   +        +                                        ~                                     
            F10  +   +        ~       +               +    +  -  +     +          +   +   +   -    +  +    + 
Fowl D      F2   +   +        +                                        ~                                    
            F3                                                         ~
            F9   +   +        +   +   +  -   +   +    +    +  -  +  +  +  +   +   +   +   +   -   +   + -  +
            F11                                                        ~
Fowl E      F6                                                         ~
            F7                                                         ~
            F8a  +   +        +                                        ~          ~   +   +   -   +   + ?  + 
            F8b                                                        ~
Goose       Go1                   ^                                    o
            Go2                                                        ^
            Go3                                                        ^
Duck B      D2                    ^                                    ^
Pigeon      Pi1                                                                                   ^
Turkey B    T1   o  o             ^  o  -    o  o     o    o  -  o o   o  o   o   o   o   o   -   o   o    o
            T2                    ^                                    ^
Meyer's parrot                    ~
Psittacine  Ps1                                                        ~
                ITR E1a b IX IVa pol pTP VA 52 pIIIa III pVII V pX pVI II 23 DBP 100 33 pVIII E3 IV E4    ITR
At                  32K    -             -                   -                               -       'E3'
Ovine D     O7   +   +  +  -  +   +   +  -   +   +   +    +   -  +  +  +  +   +   +   +   +   -  +  +  + - +
       Caprine 1                                                       ~
Duck A   D1/EDS  +  +  +  -  +   +    +  -   +   +   +    +   -  +  +  +  +   +   +   +   +   -  +  +  + U + P
Bovine D    B4   +  +  +  -  +   +    +  -   +   +   +    +   -  +  +  +  +   +   +   +   +   -  +  +  + - + P
            B5   +                                                     ~                                   + P
            B8                                                         ~  ^
     strain Rus  +  +  ~  -  o   o    o  -   o   o   o    o   -  o  o  o  o   o   o   o   o   -  o  o  o - + P P
Bovine E    B6                                                      o   ~  o                                  P
Bovine F    B7                   ~                                     ~ +
Possum      Po1                  ^                  +    ^    -        +  +                                  P
Snake A     Sn1  +  +  +  -  +   +    +  -   +   +   +    +   -  +  +  +  +   +   +   +   +   -  +  +  + - + P 
    (corn snake, boa, python)                                                                                P 
Cervine     Od1          ~                        ~                    ~
Chameleon (mountain chameleon)   ~                                                                           P
Gecko (Eublepharid, Ge1)         ~                                                                           P
       (fat-tailed gecko)
Agamid (bearded dragon)          ~                                     ~                                     P
Gekkonid (tokay gecko)           ~                                                                           P
Helodermatid (gila)              ~                                                                           P
     (Mexican beaded lizard)    ~                                                                           P 
Scincid (blue-tongued skink)     ~                                                                           P
Asp viper                        ~                                                                           P
Viperid (Parias hageni)          ~                                                                           
Snake 2                          ~                                                                           
Snake 3                          ~                                                                           
Emerald monitor (varanid)        ~                                                                           P                                                                                                                                         
Si
Frog     Fr1     + ORF -  -  +   +    +  -   +   +   +    +   -  +  +  +  +   +   +   +   + ORF + ORFs - - + P
Raptor A owl,hawko  o  -  -      ~    +  -   +   +   +    +   -  +  +  +  +   ~   o   o   o  o  o  o   o   o P P
Turkey A T3/THEV + ORF -  -  +   +    +  -   +   +   +    +   -  +  +  +  +   +   +   +   + ORF + ORFs - - +
         MSD                                                           ^  o   ^           o
Great tit                        ~   +    +  -   +   +   +    +   -  +  +  ~                                     P 
Plum headed parakeet             ~ 
Sulawesi tortoise                ~ 
Budgerigar                                                             ~                                     
Icht    
Sturgeon A (white sturgeon)  o   ~    o  -   o   o   o    o   -  o  o  +  +   o   o   o   -  -  - -   -  -   P P
 
Serotypes, even from different hosts, are grouped into species, according to calculated phylogenetic distance, 
restriction enzyme fragmentation, DNA hybridization, GC content, cross-neutralization, possibility of recombination, 
hemagglutination, and oncogenic potential. E.g., most chimpanzee AdVs and human adenovirus 4 are so similar that 
they are just different members of species Human adenovirus E. The serotypes often have different strains/variants,
but we do not show more than one from each serotype (from a single host).   taxonomy          short list
 
Signs: + full gene sequence available
       o full gene sequence not released yet
       ~ partial gene sequence available
       ^ partial gene sequence not released yet
       - corresponding gene is missing from the genome
       l = long, s = short fiber (HAdV-40, HAdV-41, FAdV-1)
       U unique genome region for EDS (containing one VA gene homologous to that of FAdV-1)
Comment: Some genes were sequenced and submitted in multiple parts, thus they are referred
in this table with close but divided ~ ~ signs.
 
Abbreviations for host species: B: Bovine, C: Canine, Cp: Caprine, D: Duck, E: Equine, F: Fowl,
Fr: Frog, G: Goat Go: Goose, GP: Guinea pig, H: Human, M: Murine, O: Ovine, Od: Odocoileus (black-tailed
deer), P: Porcine, Pi: Pigeon, S: Simian (SAdV-1 to 20 are from old world monkeys, 21 to 25 from chimpanzee), 
Sn: Snake, Sq: Squirrel, T: Turkey, TS: Tree shrew (Tupaia), WS: White sturgeon. 
 
Benko M, Harrach B, Both GW, Russell WC, Adair BM, Adám E, de Jong JC, Hess M, Johnson M, Kajon A, Kidd AH, Lehmkuhl HD, Li Q.-G, 
Mautner V, Pring-Akerblom P, Wadell G (2005) Family Adenoviridae. In Fauquet CM, Mayo MA, Maniloff J, Desselberger U, Ball LA (eds): 
Virus Taxonomy. 2nd Edition. Eighth Report of the International Committee on Taxonomy of Viruses. Academic Press, New York pp 213-228 
 
Remember: Human adenovirus 5 is not Ad5 as there are animal serotype 5 AdVs, e.g. BAdV-5, FAdV-5, OAdV-5, SAdV-5; and species 
Human adenovirus C is not “adenovirus species C” as also other AdV species have C in their names (Fowl adenovirus C, Bovine adenovirus C, etc.). 
 
 
9th International Adenovirus Meeting - Dobogókő, Hungary, 26-30 April 2009  
     Participants    Programme   
May we send you the pdf of the Book of Abstracts?  (1.2 MB)
 
 
Started by Balázs Harrach, Tibor Papp and Márta Lörincz, updated by Szilvia L. Farkas.
Last update by B. Harrach on March 1, 2010.

 

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